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IJFESTOpen access · Peer reviewed International Journal of Future Engineering and Sustainable Technologies ReoTek International Journals · Double-blind peer review · CC BY 4.0

Research article · Applied Artificial Intelligence

Calibrated channel omnibus feature selection for ultra-high-dimensional biomedical data

Why no single relevance criterion is safe when the effect composition is unknown

Authors

Abstract

Feature selection on ultra-high-dimensional biomedical arrays is routinely benchmarked with a single relevance criterion, and comparative studies of methods such as mRMR and SVM-RFE report accuracy without asking whether the criterion matches the way the classes actually differ. This work shows that the question is not incidental. Classes may separate through a shift in location, a shift in dispersion at equal means, or a switch-like activation restricted to a subgroup, and a criterion consistent against one of these families can be no better than chance against another. Because the composition of effects in a real assay is unknown before selection, committing to one criterion is a wager rather than a design choice. We propose CALICO-FS, a single-stage omnibus ranker that maps three complementary dependence statistics onto a common permutation-calibrated scale, estimates the reliability of each from excess tail mass, and fuses them by a reliability-weighted mean. On a controlled benchmark of 12625 features and 21 samples with planted ground truth, CALICO-FS attains a worst-case recall over four effect regimes of 0.288 against 0.198 for the strongest of six baselines, and the best mean recall of 0.443. Across ninety-six paired comparisons it is never significantly worse than any baseline in any regime and is significantly better in twenty of twenty-four. We also report two negative findings that qualify the contribution: the method is less stable under resampling than classical filters, and its recovery advantage does not transfer to downstream classification accuracy.

Keywords

feature selection high-dimensional data gene expression permutation calibration selection stability omnibus testing

How to cite

Cite this article Saswat Swain, Chandrasekhar Panda and Pravat Satpathy, “Calibrated channel omnibus feature selection for ultra-high-dimensional biomedical data,” International Journal of Future Engineering and Sustainable Technologies, vol. 1, no. 1, pp. 20–25, 15 August 2026. doi: 10.00000/ijfest.v1i1.004

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